Uncomplicated UTI (acute cystitis, non-pregnant adult)
shard-3-neuro-sym Phase C 2026-05-14 — initial author at PRODUCTION with full §5.5 contract depth. 9 acuity / context phenotypes encoded as severity_triggers: acute_uncomplicated_cystitis, recurrent_uti, asymptomatic_bacteriuria, honeymoon_cystitis, catheter_associated_uti (route off), complicated_uti (route off), pyelonephritis_concern (route off), sti_overlap, resistant_or_esbl_e_coli. Pivot from sibling rows because per-phenotype dossiers do not exist (same engine, different management branch). 5 setting playbooks span the full journey: home (recognition + when to call PCP / ED) → outpatient (IDSA 2010 first-line empiric without routine UA / culture) → ed (severe symptoms + pyelo concern) → icu (urosepsis — RARE in uncomplicated; signals misclassification) → inpatient (non-responder pyelo + pregnancy complicated). IDSA 2010 first-line: nitrofurantoin 100 mg PO BID × 5 d (avoid if CrCl <30); fosfomycin 3 g PO × 1; TMP-SMX DS BID × 3 d if local resistance <20%. AVOID FQ first-line per FDA Black Box + IDSA collateral-damage doctrine. Pregnancy: cefpodoxime / cephalexin first-line. AVOID nitrofurantoin near term (G6PD neonatal hemolysis), sulfa near term (kernicterus), FQ throughout (cartilage). Asymptomatic bacteriuria MUST be treated in pregnancy (USPSTF 2019). Recurrent UTI (≥2/6mo or ≥3/12mo) — AUA 2022 prophylaxis: continuous low-dose nitrofurantoin / TMP-SMX OR post-coital single dose OR topical vaginal estrogen postmenopausal OR methenamine OR cranberry weak. Asymptomatic bacteriuria — treat ONLY in pregnancy or pre-urologic procedure (IDSA / USPSTF 2019); over-treatment drives resistance + C. difficile. Schema-blocked downstream: calc.uti_symptom_score (ACSS), protocol.uti_first_line_empiric, panel.local_antibiogram, uro.uti.complicated.v1, uro.pyelonephritis.v1, uro.cauti.v1 — none yet in clinical-tools-registry.ts. Tickets surfaced in docs/framework-audit/shard-3-neuro-sym-state.md. 2026-05-22 citation remediation — all prior PMIDs live-verified on PubMed; six were mis-attributed to unrelated articles and replaced with verified UTI anchors; RxCUIs reverse-verified on RxNav. Sibling pivots: symptom.hematuria.v1 (post-UTI hematuria persistence pivot), uro.urolithiasis.v1 (this commit — flank pain + dysuria overlap), id.cellulitis.core.v1 (Fournier adjacency stand-in) — all resolve to real engines in ALL_DOSSIERS.
Entry points (6)
- symptomDysuria + frequency + urgency in adult woman (IDSA 2010 PMID 21292654 — high PPV alone for cystitis)dysuria_frequency_urgency
- symptomSuprapubic discomfort + cystitis symptoms (IDSA 2010)suprapubic_discomfort
- symptomGross hematuria + cystitis symptoms (still uncomplicated if no fever/flank pain) (IDSA 2010)gross_hematuria_with_cystitis
- historyRecurrent UTI (≥2/6mo or ≥3/12mo) → prophylaxis discussion (AUA 2022)recurrent_uti_pattern
- lab_abnormalityPositive urine culture without symptoms — treat ONLY in pregnancy or pre-urologic procedure (IDSA / USPSTF 2019)positive_culture_asymptomatic
- symptomPost-coital UTI pattern → honeymoon cystitis; post-coital prophylaxis discussion (AUA 2022)post_coital_pattern
Required inputs (19)
- sexrequireddemographic • used at FRAMEEngine scope is adult women; men require complicated UTI workup (anatomic / prostate concern) — route off (IDSA 2010)
- pregnancy_statusrequireddemographic • used at FRAMEPregnancy → complicated pathway; ASB must be treated; cephalosporin empirics; avoid nitrofurantoin near term + sulfa near term + FQ throughout (IDSA / USPSTF 2019)
- agerequireddemographic • used at CONTEXTPostmenopausal → topical vaginal estrogen consideration; <30 + sexual activity → STI panel if sterile pyuria (CDC 2021)
- recent_antibioticsrequiredhistory • used at CONTEXTRecent TMP-SMX (≤3 mo) → avoid empiric TMP-SMX; recent FQ → avoid FQ; broaden empirics if recent broad-spectrum (IDSA 2010)
- diabetesrequiredhistory • used at CONTEXTPoorly controlled DM → complicated UTI risk; consider culture and longer duration (IDSA 2010)
- immunosuppressionrequiredhistory • used at CONTEXTImmunocompromised → complicated UTI pathway; broaden empirics + culture (IDSA 2010)
- anatomic_anomaly_or_stone_historyrequiredhistory • used at CONTEXTAnatomic anomaly, prior stones, recent instrumentation → complicated pathway (IDSA 2010)
- sexual_activity_recenthistory • used at CONTEXTRecent intercourse + dysuria → honeymoon cystitis pattern; STI panel if <30 + risk factors (CDC 2021)
- prior_uti_count_6_to_12morequiredhistory • used at CONTEXT≥2/6mo or ≥3/12mo → recurrent UTI; prophylaxis discussion (AUA 2022)
- menopause_statushistory • used at CONTEXTPostmenopausal → topical vaginal estrogen prophylaxis discussion (AUA 2022)
- catheter_in_placerequiredhistory • used at FRAMEIndwelling catheter → CAUTI pathway (IDSA 2019); route off this engine
- temprequiredvital • used at RED_FLAGSFever + flank pain → pyelonephritis pathway (route off engine to future pyelo engine); fever alone in cystitis is atypical (IDSA 2010)
- flank_painrequiredsymptom • used at RED_FLAGSFlank pain → pyelonephritis pathway (IDSA 2010)
- sbpvital • used at CONTEXTHypotension + fever + dysuria → urosepsis ICU pathway (rare in uncomplicated — usually signals pyelo + obstruction)
- urinalysislab • used at INITIAL_WORKUPLeuk-esterase + nitrite confirm + sterile pyuria → STI / pyelo / TB pivot; not routinely required if classic presentation (IDSA 2010)
- urine_culturelab • used at INITIAL_WORKUPRecurrent / pregnancy / treatment failure / atypical / male / DM poorly controlled → culture; not routine for classic uncomplicated cystitis (IDSA 2010)
- creatininerequiredlab • used at TREATMENTDose adjustment — nitrofurantoin avoid if CrCl <30; dose adjust cefpodoxime / cephalexin if eGFR low (IDSA 2010)
- sti_naat_panellab • used at BRANCHING_WORKUPSterile pyuria + <30 + sexual activity → NAAT chlamydia + gonorrhea + trichomonas (CDC 2021)
- current_medsrequiredmedication • used at TREATMENTAnticoagulant + nitrofurantoin interaction; methotrexate + sulfa toxicity; warfarin + sulfa INR rise (IDSA 2010)
12-phase flow (12)
- 1FRAMENon-pregnant adult woman with dysuria + frequency + urgency — acute uncomplicated cystitis differential. Explicit pivots OFF engine for: pregnancy, men, immunocompromised, anatomic anomaly, catheter, fever + flank pain (IDSA 2010)inputs: sex, pregnancy_status, catheter_in_placeadvance: engine scope confirmed
- 2ENTRYDysuria + frequency + urgency ± suprapubic discomfort ± hematuria; rule in cystitis (IDSA 2010)inputs: ageadvance: entry captured
- 3CONTEXTPregnancy, recent abx, DM, immunocompromise, anatomic anomaly, sexual activity, prior UTI history, menopause, sexual activity, STI risk (IDSA 2010; CDC 2021; AUA 2022)inputs: recent_antibiotics, diabetes, immunosuppression, anatomic_anomaly_or_stone_history, sexual_activity_recent, prior_uti_count_6_to_12mo, menopause_status, current_medsadvance: context complete; engine still applies
- 4RED_FLAGSFever + flank pain → pyelonephritis (route off engine); hemodynamic instability → urosepsis ICU; pregnancy → complicated pathway; immunocompromise → broaden (IDSA 2010)inputs: temp, flank_pain, sbpadvance: no red flags OR route off
- 5INITIAL_WORKUPNOT routinely required if classic presentation in healthy non-pregnant woman (IDSA 2010 — symptoms alone have high PPV). UA + culture if pregnancy / recurrent / atypical / treatment failure (IDSA 2010)inputs: urinalysis, urine_cultureactions: panel.ua, panel.renaladvance: workup tier selected
- 6BRANCHING_WORKUPSterile pyuria → STI / pyelo / TB / contamination pivot; recurrent → prophylaxis discussion; pregnancy → cephalosporin empirics; resistant E. coli → broaden (IDSA 2010; CDC 2021)inputs: sti_naat_paneladvance: pivot or proceed to treatment
- 7DIFFERENTIALUncomplicated cystitis vs complicated UTI (route off) vs pyelonephritis (route off) vs vaginitis vs urethritis (STI) vs interstitial cystitis vs renal colic vs hematuria workup (real symptom.hematuria.v1) (IDSA 2010)advance: differential narrowed
- 8RISK_STRATIFICATIONIDSA 2010 uncomplicated criteria; local E. coli resistance to TMP-SMX (>20% → avoid); recurrent UTI tier (≥2/6mo or ≥3/12mo) → prophylaxis (IDSA 2010; AUA 2022)inputs: creatinineadvance: regimen tier selected
- 9TREATMENTFirst-line: nitrofurantoin 100 mg PO BID × 5 d (avoid if CrCl <30) OR fosfomycin 3 g PO × 1 OR TMP-SMX DS BID × 3 d if R <20%. AVOID FQ first-line per FDA Black Box. Pregnancy: cefpodoxime / cephalexin. Recurrent: prophylaxis (continuous, post-coital, topical estrogen, methenamine, cranberry weak) (IDSA 2010; AUA 2022)inputs: creatinineadvance: regimen prescribed
- 10DISPOSITIONOutpatient discharge with 48 h re-check if no improvement; rare admission only for pyelo / sepsis / pregnancy obstruction (IDSA 2010)advance: disposition documented
- 11MONITORINGSymptom resolution by 48–72 h; if persists → culture-directed therapy; reassess for pyelonephritis if fever / flank pain develops (IDSA 2010)advance: monitoring plan documented
- 12FOLLOWUPRecurrent UTI → prophylaxis options (continuous low-dose, post-coital, topical vaginal estrogen postmenopausal, methenamine, cranberry weak per AUA 2022); urology referral if breakthrough on prophylaxis (AUA 2022)advance: follow-up + prophylaxis scheduled if recurrent